Peptide Sentinel

Data-led reporting on the peptide research record

Archive

Data

Every number on this site is computed from one of four tables, and every table is downloadable.

Every figure this publication has printed comes from one of these four tables. They are generated by a single script against files in the open, and they are the point: a number nobody can check is not reporting.

The four datasets behind this publication
DatasetRowsColumnsSizeUsed by
Retrieval coverage, per compound77127 KBIndex depth
Derived evidence tier, per compound771314 KBEvidence mix
Negation screen, every flagged title681 KBNegative findings
Federal Register, four compounding terms67310286 KBThe register

Each dataset has a page of its own describing what every column holds and what the file cannot be used for. The methods page states the rules that apply to all four.

Format and reuse

All four are comma-separated UTF-8 with a single header row, quoted where a value contains a comma or a quotation mark. They can be re-generated from this repository's corpus with one command, which is stated on each dataset page.

They may be re-used with attribution. The one thing they must not be used for is stated on every dataset page individually, because it differs: a derived label is not a clinical judgement, and a flagged title is not a finding.